TFIP11

TFIP11
Identifiers
Aliases	TFIP11, NTR1, Spp382, TIP39, bK445C9.6, hNtr1, tuftelin interacting protein 11, STIP, STIP-1
External IDs	OMIM: 612747; MGI: 1930075; HomoloGene: 40813; GeneCards: TFIP11; OMA:TFIP11 - orthologs
Gene location (Human)
Chr.	Chromosome 22 (human)
End	26,512,505 bp
Gene location (Mouse)
Chr.	Chromosome 5 (mouse)
End	112,485,939 bp
RNA expression pattern
	Top expressed in
	granulocyte; ; muscle of thigh; ; gastrocnemius muscle; ; apex of heart; ; testicle; ; tendon of biceps brachii; ; sural nerve; ; left testis; ; Achilles tendon; ; right testis;
	Top expressed in
	superior surface of tongue; ; gallbladder; ; granulocyte; ; Rostral migratory stream; ; neural layer of retina; ; dentate gyrus of hippocampal formation granule cell; ; superior frontal gyrus; ; epiblast; ; ventricular zone; ; yolk sac;
	More reference expression data
	; ;
	More reference expression data
Gene ontology
Molecular function	protein binding; nucleic acid binding;
Cellular component	cytoplasm; nuclear speck; catalytic step 2 spliceosome; U2-type post-mRNA release spliceosomal complex; nucleolus; spliceosomal complex; nucleus; nucleoplasm; extracellular matrix;
Biological process	RNA processing; protection from non-homologous end joining at telomere; negative regulation of protein-containing complex assembly; biomineral tissue development; mRNA processing; spliceosomal complex disassembly; negative regulation of protein binding; negative regulation of double-strand break repair via nonhomologous end joining; RNA splicing; negative regulation of DNA ligase activity; mRNA splicing, via spliceosome;
	Sources:Amigo / QuickGO
Orthologs
	24144
	54723
	ENSG00000100109
	ENSMUSG00000029345
	Q9UBB9
	Q9ERA6
NM_001008697; NM_001346857; NM_001346858; NM_001346859; NM_001346861;
	NM_001346862; NM_012143
	NM_018783
NP_001008697; NP_001333786; NP_001333787; NP_001333788; NP_001333790;
	NP_001333791; NP_036275
	NP_061253
	Wikidata
View/Edit Human	View/Edit Mouse

Tuftelin-interacting protein 11 is a protein that in humans is encoded by the TFIP11 gene.⁵⁶⁷

Interactions

TFIP11 has been shown to interact with Tuftelin.⁵{

References

GRCh38: Ensembl release 89: ENSG00000100109 – Ensembl, May 2017
GRCm38: Ensembl release 89: ENSMUSG00000029345 – Ensembl, May 2017
"Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
"Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
Paine CT, Paine ML, Luo W, Okamoto CT, Lyngstadaas SP, Snead ML (Aug 2000). "A tuftelin-interacting protein (TIP39) localizes to the apical secretory pole of mouse ameloblasts". J Biol Chem. 275 (29): 22284–92. doi:10.1074/jbc.M000118200. PMID 10806191.
Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Bocher M, Blocker H, Bauersachs S, Blum H, Lauber J, Dusterhoft A, Beyer A, Kohrer K, Strack N, Mewes HW, Ottenwalder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (Mar 2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
"Entrez Gene: TFIP11 tuftelin interacting protein 11".

Further reading

Dunham I, Shimizu N, Roe BA, et al. (1999). "The DNA sequence of human chromosome 22". Nature. 402 (6761): 489–95. Bibcode:1999Natur.402..489D. doi:10.1038/990031. PMID 10591208.
Zhang QH, Ye M, Wu XY, et al. (2001). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152.
Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
Jurica MS, Licklider LJ, Gygi SR, et al. (2002). "Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis". RNA. 8 (4): 426–39. doi:10.1017/S1355838202021088. PMC 1370266. PMID 11991638.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Collins JE, Goward ME, Cole CG, et al. (2003). "Reevaluating human gene annotation: a second-generation analysis of chromosome 22". Genome Res. 13 (1): 27–36. doi:10.1101/gr.695703. PMC 430954. PMID 12529303.
Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
Wen X, Lei YP, Zhou YL, et al. (2005). "Structural organization and cellular localization of tuftelin-interacting protein 11 (TFIP11)". Cell. Mol. Life Sci. 62 (9): 1038–46. doi:10.1007/s00018-005-4547-z. PMC 11924494. PMID 15868102. S2CID 11241573.
Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000100109 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000029345 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid10806191-5] Paine CT, Paine ML, Luo W, Okamoto CT, Lyngstadaas SP, Snead ML (Aug 2000). "A tuftelin-interacting protein (TIP39) localizes to the apical secretory pole of mouse ameloblasts". J Biol Chem. 275 (29): 22284–92. doi:10.1074/jbc.M000118200. PMID 10806191.

[pmid11230166-6] Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Bocher M, Blocker H, Bauersachs S, Blum H, Lauber J, Dusterhoft A, Beyer A, Kohrer K, Strack N, Mewes HW, Ottenwalder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (Mar 2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.

[entrez-7] "Entrez Gene: TFIP11 tuftelin interacting protein 11".

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