Article · Wikipedia archive · Last revised Jul 25, 2026

PCDH11Y

PCDH11Y is a gene unique to Homo males that encodes Protocadherin 11Y, a protein that guides the development of nerve cells. PCDH11X, located on the X chromosome, is common, in both sexes, to humans and our nearest relative, the chimpanzee; however, PCDH11Y, located on the Y chromosome, is unique to males.

Last revised
Jul 25, 2026
Read time
≈ 2 min
Length
514 w
Citations
12
Source
PCDH11Y
Identifiers
AliasesPCDH11Y, PCDH-PC, PCDH22, PCDHX, PCDHY, protocadherin 11 Y-linked
External IDsOMIM: 400022; GeneCards: PCDH11Y; OMA:PCDH11Y - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001278619
NM_032971
NM_032972
NM_032973
NM_001395587

n/a

RefSeq (protein)

NP_001265548
NP_116753
NP_116754
NP_116755

n/a

Location (UCSC)Chr Y: 5 – 5.74 Mbn/a
PubMed search2n/a
Wikidata
View/Edit Human

PCDH11Y is a Y-linked gene in the genus Homo that encodes protocadherin 11Y, a protein that guides the development of nerve cells. It is the Y-chromosomal paralog of PCDH11X, which is located on the X chromosome and thus common to both sexes in humans and some of our nearest relatives including chimpanzees.34 11X/Y are cadherin family genes, cell-adhesion molecules involved in neuronal signalling which attach to the surface of neurons.5 The X- and Y-isoforms respond in different ways to retinoic acid, a chemical involved in the development of embryos, which stimulates the activity of 11Y but suppresses that of 11X. It is one possible contributor towards the sex-biased neurophysiology of humans.3

Relevance to human evolution

It has been calculated that 11X transposed from the X to Y chromosome around three million years ago, perhaps coincident with the evolutionary expansion of human brain size and the first use of stone tools. A new intron and inversion also occurred in the 11Y around 120,000 to 200,000 years ago, coincident with the period of modern human expansion out of Africa (from which all non-African humans descend) and the onset of anthropologically modern culture termed behavioral modernity.5

British psychiatrist Tim Crow, who worked on the evolution of human psychiatric disease such as schizophrenia, proposed the gene is a major contributor to lateralisation, which he believed underlies human cognitive abilities. Humans are a strong outlier in brain lateralisation among primates, which among other effects gives rise to our relatively unique handedness trait.6 Further, there is a substantial bias towards right-handedness in all modern humans as compared to chimpanzees: 90% of humans will use their right hands for minor motor tasks, whereas chimpanzees display no preference.3 Crow suggested this precludes a random or cultural origin for right-preference, adding that true ambidexterity is associated with developmental delay and psychosis.7

References

References

  1. GRCh38: Ensembl release 89: ENSG00000099715Ensembl, May 2017
  2. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. "Science and Technology: The genetics of lateralisation". The Economist. 26 April 2001.
  4. Wilson ND, Ross LJ, Close J, Mott R, Crow TJ, Volpi EV (2007). "Replication profile of PCDH11X and PCDH11Y, a gene pair located in the non-pseudoautosomal homologous region Xq21.3/Yp11.2". Chromosome Research. 15 (4): 485–498. doi:10.1007/s10577-007-1153-y. PMC 2779385. PMID 17671842.
  5. Burne J (18 August 2001). "Y and Mighty". the Guardian. The Guardian.
  6. Püschel TA, Hurwitz RM, Venditti C (April 2026). "Bipedalism and brain expansion explain human handedness". PLoS Biology. 24 (4) e3003771. doi:10.1371/journal.pbio.3003771. PMC 13138751. PMID 42044164.
  7. "Why having it both ways is bad for you". The Guardian. 1999-07-20. ISSN 0261-3077. Retrieved 2026-06-26.