Optimized Multicolor Immunofluorescence Panel, abbreviation OMIP, was a series of standardized multi-color flow cytometry panel launched by International Society for Advancement of Cytometry (ISAC), published in the form of columns in Cytometry Part A.123 The first two OMIP articles were published in September 2010 issue of this journal.4
Purpose
The goals of OMIPs are:
- to alleviate the development time for researchers who wish to use the same (or highly similar) panels
- to provide a starting point for the creation of novel OMIPs, and
- to provide a mechanism for attribution to the developers of the panel via citation of the publication.1
List
| No. | No. of colors | Purpose | Species | Cell types | Paper | Year | Cytometry |
|---|---|---|---|---|---|---|---|
| OMIP-001 | 16 | T-cell cytokine production after in vitro stimulation and phenotyping of cytokine-producing T-cells | Human | PBMC | 54 | 2010 | BD LSR II |
| OMIP-002 | 16 | Specificity and phenotype of CD8+ T-cells | Human | PBMC, bone marrow mononuclear cells | 64 | 2010 | BD LSR II |
| OMIP-003 | 12 | Phenotyping memory B cells | human | PBMC, bone marrow, and tonsil mononuclear cell | 7 | 2011 | BD LSR II |
| OMIP-004 | 15 | Determine Treg levels and to provide an in depth characterization of Tregs | Human | PBMC, ACK-lysed blood | 8 | 2012 | BD LSRFortessa |
| OMIP-005 | 11 | T cell cytokine production and memory phenotype | Rhesus macaque | PBMC | 9 | 2012 | BD LSR II |
| OMIP-006 | 9 | Enumerating and phenotyping of T regulatory cells and subsets | Human | PBMC | 10 | 2012 | BD LSR II |
| OMIP-007 | 14 | Characterize the phenotype, maturation, and activation of NK cells | Human | PBMC | 11 | 2012 | |
| OMIP-008 | 11 | T cell cytokine production following in vitro stimulation | Human | PBMC, T cell clones/lines, tumor-resident T cell lines | 12 | 2012 | |
| OMIP-009 | 10 | phenotype and function of CD4+ and CD8+ T-cells | Human | PBMC | 13 | 2012 | |
| OMIP-010 | 10 | immunophenotyping of small hematopoietic cell | Human | Cerebrospinal fluid, bone marrow, peripheral blood | 14 | 2012 | |
| OMIP-011 | 8 | Characterization of CECs in peripheral blood | Human | Whole blood, RBC-lysed and washed | 15 | 2012 | |
| OMIP-012 | 9 | Human leukocyte reconstitution and phenotype | Humanized mouse | Whole blood, Ficoll-separated PBMC, splenocytes | 16 | 2012 | |
| OMIP-013 | 13 | T-cell differentiation | Human | PBMC | 17 | 2012 | |
| OMIP-014 | 12 | T-cell cytokine production and function after in vitro stimulation | Human | Cryopreserved PBMC | 18 | 2012 | |
| OMIP-015 | 13 | T-reg characterization and T-cell activation | Human | PBMC | 19 | 2013 | |
| OMIP-016 | 10 | Quality and phenotype of antigen-specific CD4 and CD8 T cells | Cynomolgus macaque or Human | Fresh or cryopreserved PBMCs | 20 | 2013 | |
| OMIP-017 | 13 | CD4+ helper T-cell subsets (Th1, Th2, Th9, Th17, Th17Th1, Th22 and TFH) | Human | PBMC | 21 | 2013 | |
| OMIP-018 | 15 | Phenotype of CD4 T cell subsets via chemokine receptor expression | Human | Fresh PBMC, Bone marrow mononuclear cells | 2223 | 2013 | |
| OMIP-019 | 14 | γδT-cells, iNKT-cells, haematopoietic precursors | Human | PBMC | 24 | 2013 | |
| OMIP-020 | 12 | γδ T-cell differentiation phenotype | Human | PBMC | 25 | 2014 | |
| OMIP-021 | 14 | NKT cells, γδ T-cells, MAIT cells, Memory T cell subsets | Human | PBMC | 26 | 2014 | |
| OMIP-022 | 14 | T-cell phenotyping, memory categorization, cytokine production, and function following in vitro stimulation | Human | Cryopreserved PBMC (adult and infant) | 27 | 2014 | |
| OMIP-023 | 10 | In-depth phenotyping of the main leukocyte subtypes in one run | Human | Fresh EDTA-treated peripheral blood, RBC-lysed and Fresh EDTA-treated Cord-blood | 28 | 2014 | |
| OMIP-024 | 18 | Characterize the phenotype of PBMC leukocyte subsets | Human | Cryopreserved PBMC from adults and infants | 29 | 2014 | |
| OMIP-025 | 16 | Characterization of antigen-specific T cells, TFH-like cells and NK cells | Human | Cryopreserved PBMC | 30 | 2014 | |
| OMIP-026 | 14 | Phenotype of B and plasma cells | Rhesus macaque, African green monkey | Fresh whole blood, PBMCs, mononuclear cells of bone marrow, lymph node, spleen, tonsil | 31 | 2015 | |
| OMIP-027 | |||||||
| OMIP-028 | |||||||
| OMIP-029 | |||||||
| OMIP-030 | |||||||
| OMIP-031 | |||||||
| OMIP-032 | 32 | ||||||
| OMIP-033 | |||||||
| OMIP-034 | |||||||
| OMIP-035 | |||||||
| OMIP-036 | |||||||
| OMIP-037 | |||||||
| OMIP-038 | |||||||
| OMIP-039 | |||||||
| OMIP-040 | |||||||
| OMIP-041 | |||||||
| OMIP-042 | |||||||
| OMIP-043 | |||||||
| OMIP-044 | |||||||
| OMIP-045 | |||||||
| OMIP-046 | |||||||
| OMIP-047 | |||||||
| OMIP-048 | |||||||
| OMIP-049 | 19 | Subset analysis of hematopoiesis and hematopoietic disease | Human | Any source containing human myeloid cells | 33 | 2018 | BD LSR II |
| OMIP-050 | 28 | 34 | |||||
| OMIP-051 | |||||||
| OMIP-052 | |||||||
| OMIP-053 | |||||||
| OMIP-054 | |||||||
| OMIP-055 | |||||||
| OMIP-056 | |||||||
| OMIP-057 | |||||||
| OMIP-058 | |||||||
| OMIP-059 | |||||||
| OMIP-060 | |||||||
| OMIP-061 | |||||||
| OMIP-062 | 14 | Myeloid and innate/adaptive lymphoid comprehensive immunophenotyping | Human | Whole peripheral blood, cord blood, PBMCs, nasal aspirate, and tracheal aspirate samples | 35 | 2019 | BD LSRFortessa |
| OMIP-063 | |||||||
| OMIP-064 | |||||||
| OMIP-065 | |||||||
| OMIP-066 | |||||||
| OMIP-067 | |||||||
| OMIP-068 | |||||||
| OMIP-069 | |||||||
| OMIP-070 | |||||||
| OMIP-071 | |||||||
| OMIP-072 | |||||||
| OMIP-073 | |||||||
| OMIP-074 | |||||||
| OMIP-075 | |||||||
| OMIP-076 | |||||||
| OMIP-077 | |||||||
| OMIP-078 | |||||||
| OMIP-079 | |||||||
| OMIP-080 | |||||||
| OMIP-081 | |||||||
| OMIP-082 | 25 | ||||||
| OMIP-083 | 18 | ||||||
| OMIP-084 | 28 | ||||||
| OMIP-085 | 8 | ||||||
| OMIP-086 | 22 | ||||||
| OMIP-087 | |||||||
| OMIP-088 | |||||||
| OMIP-089 | 8 | ||||||
| OMIP-090 | 18 | ||||||
| OMIP-091 | 27 | ||||||
| OMIP-092 | 6 | ||||||
| OMIP-093 | 41 | ||||||
| OMIP-094 | 24 | ||||||
| OMIP-095 | |||||||
| OMIP-096 | |||||||
| OMIP-097 | |||||||
| OMIP-098 | |||||||
| OMIP-099 | |||||||
| OMIP-100 | |||||||
| OMIP-101 | 27 | Broad immunophenotyping of leukocytes including myeloid (neutrophils, monocytes, mDCs) and lymphoid cell lineages (conventional T cells, DURT cells, γδT cells, B cells, NK cells, ILCs) | Human | Fresh or fixed, cryopreserved whole blood | 36 | 2024 | BD FACSymphony A5 |
References
References
- Mahnke, Yolanda; Chattopadhyay, Pratip; Roederer, Mario (September 2010). "Publication of optimized multicolor immunofluorescence panels". Cytometry Part A. 77A (9): 814–818. doi:10.1002/cyto.a.20916. PMID 20722004.
- Tárnok, A (September 2016). "OMIPs start school". Cytometry Part A. 89 (9): 795–6. doi:10.1002/cyto.a.22976. PMID 27657547.
- Mahnke, Y; Tárnok, A (28 September 2020). "Celebrating 10 Years of OMIPs". Cytometry Part A. doi:10.1002/cyto.a.24233. PMID 32985101.
- Roederer, M; Tárnok, A (September 2010). "OMIPs--Orchestrating multiplexity in polychromatic science". Cytometry Part A. 77 (9): 811–2. doi:10.1002/cyto.a.20959. PMID 20722007.
- Mahnke, YD; Roederer, M (September 2010). "OMIP-001: Quality and phenotype of Ag-responsive human T-cells". Cytometry Part A. 77 (9): 819–20. doi:10.1002/cyto.a.20944. PMID 20722005.
- Chattopadhyay, PK; Roederer, M; Price, DA (September 2010). "OMIP-002: Phenotypic analysis of specific human CD8+ T-cells using peptide-MHC class I multimers for any of four epitopes". Cytometry Part A. 77 (9): 821–2. doi:10.1002/cyto.a.20945. PMID 20722006.
- Wei, C; Jung, J; Sanz, I (November 2011). "OMIP-003: phenotypic analysis of human memory B cells". Cytometry Part A. 79 (11): 894–6. doi:10.1002/cyto.a.21112. PMC 3199331. PMID 21796774.
- Biancotto, A; Dagur, PK; Fuchs, JC; Langweiler, M; McCoy JP, Jr (January 2012). "OMIP-004: in-depth characterization of human T regulatory cells". Cytometry Part A. 81 (1): 15–6. doi:10.1002/cyto.a.21158. PMC 3510978. PMID 22052639.
- Foulds, KE; Donaldson, M; Roederer, M (May 2012). "OMIP-005: Quality and phenotype of antigen-responsive rhesus macaque T cells". Cytometry Part A. 81 (5): 360–1. doi:10.1002/cyto.a.22008. PMC 11389872. PMID 22438313.
- Murdoch, DM; Staats, JS; Weinhold, KJ (April 2012). "OMIP-006: phenotypic subset analysis of human T regulatory cells via polychromatic flow cytometry". Cytometry Part A. 81 (4): 281–3. doi:10.1002/cyto.a.22024. PMC 3352600. PMID 22319016.
- Eller, MA; Currier, JR (June 2012). "OMIP-007: phenotypic analysis of human natural killer cells". Cytometry Part A. 81 (6): 447–9. doi:10.1002/cyto.a.22033. PMID 22411905.
- Zuleger, CL; Albertini, MR (June 2012). "OMIP-008: measurement of Th1 and Th2 cytokine polyfunctionality of human T cells". Cytometry Part A. 81 (6): 450–2. doi:10.1002/cyto.a.22035. PMC 3418807. PMID 22431369.
- Lamoreaux, L; Koup, RA; Roederer, M (May 2012). "OMIP-009: Characterization of antigen-specific human T-cells". Cytometry Part A. 81 (5): 362–3. doi:10.1002/cyto.a.22042. PMID 22438322.
- Preijers, FW; Huys, E; Moshaver, B (June 2012). "OMIP-010: a new 10-color monoclonal antibody panel for polychromatic immunophenotyping of small hematopoietic cell samples". Cytometry Part A. 81 (6): 453–5. doi:10.1002/cyto.a.22056. PMID 22532446.
- Lachmann, R; Lanuti, P; Miscia, S (July 2012). "OMIP-011: Characterization of circulating endothelial cells (CECs) in peripheral blood". Cytometry Part A. 81 (7): 549–51. doi:10.1002/cyto.a.22071. PMID 22648996.
- Long, BR; Stoddart, CA (August 2012). "OMIP-012: Phenotypic and numeric determination of human leukocyte reconstitution in humanized mice". Cytometry Part A. 81 (8): 646–8. doi:10.1002/cyto.a.22074. PMID 22653780.
- Mahnke, YD; Beddall, MH; Roederer, M (November 2012). "OMIP-013: differentiation of human T-cells". Cytometry Part A. 81 (11): 935–6. doi:10.1002/cyto.a.22201. PMID 23027685.
- De Rosa, SC; Carter, DK; McElrath, MJ (December 2012). "OMIP-014: validated multifunctional characterization of antigen-specific human T cells by intracellular cytokine staining". Cytometry Part A. 81 (12): 1019–21. doi:10.1002/cyto.a.22218. PMC 3581864. PMID 23081852.
- Mahnke, YD; Beddall, MH; Roederer, M (February 2013). "OMIP-015: human regulatory and activated T-cells without intracellular staining". Cytometry Part A. 83 (2): 179–81. doi:10.1002/cyto.a.22230. PMID 23166007.
- Guenounou, S; Bosquet, N; Dembek, CJ; Le Grand, R; Cosma, A (February 2013). "OMIP-016: Characterization of antigen-responsive macaque and human T-cells". Cytometry Part A. 83 (2): 182–4. doi:10.1002/cyto.a.22233. PMID 23184609.
- Mahnke, YD; Beddall, MH; Roederer, M (May 2013). "OMIP-017: human CD4(+) helper T-cell subsets including follicular helper cells". Cytometry Part A. 83 (5): 439–40. doi:10.1002/cyto.a.22269. PMC 4347402. PMID 23450796.
- Brodie, T; Brenna, E; Sallusto, F (June 2013). "OMIP-018: chemokine receptor expression on human T helper cells". Cytometry Part A. 83 (6): 530–2. doi:10.1002/cyto.a.22278. PMID 23504907.
- Brodie, Tess; Brenna, Elena; Sallusto, Federica (2013). "Corrigendum for OMIP-018: Chemokine receptor expression on human T helper cells". Cytometry Part A. 83 (11): 1041–1045. doi:10.1002/cyto.a.22346.
- Mahnke, YD; Beddall, MH; Roederer, M (August 2013). "OMIP-019: quantification of human γδT-cells, iNKT-cells, and hematopoietic precursors". Cytometry Part A. 83 (8): 676–8. doi:10.1002/cyto.a.22326. PMID 23897714.
- Wistuba-Hamprecht, K; Pawelec, G; Derhovanessian, E (June 2014). "OMIP-020: phenotypic characterization of human γδ T-cells by multicolor flow cytometry". Cytometry Part A. 85 (6): 522–4. doi:10.1002/cyto.a.22470. PMID 24756989.
- Gherardin, NA; Ritchie, DS; Godfrey, DI; Neeson, PJ (July 2014). "OMIP-021: Simultaneous quantification of human conventional and innate-like T-cell subsets". Cytometry Part A. 85 (7): 573–5. doi:10.1002/cyto.a.22475. PMID 24757011.
- Graves, AJ; Padilla, MG; Hokey, DA (July 2014). "OMIP-022: Comprehensive assessment of antigen-specific human T-cell functionality and memory". Cytometry Part A. 85 (7): 576–9. doi:10.1002/cyto.a.22478. PMC 4231567. PMID 24866990.
- Bocsi, J; Melzer, S; Dähnert, I; Tárnok, A (September 2014). "OMIP-023: 10-color, 13 antibody panel for in-depth phenotyping of human peripheral blood leukocytes". Cytometry Part A. 85 (9): 781–4. doi:10.1002/cyto.a.22505. PMID 25132115.
- Moncunill, G; Han, H; Dobaño, C; McElrath, MJ; De Rosa, SC (December 2014). "OMIP-024: pan-leukocyte immunophenotypic characterization of PBMC subsets in human samples". Cytometry Part A. 85 (12): 995–8. doi:10.1002/cyto.a.22580. PMC 4457440. PMID 25352070.
- Moncunill, G; Dobaño, C; McElrath, MJ; De Rosa, SC (April 2015). "OMIP-025: evaluation of human T- and NK-cell responses including memory and follicular helper phenotype by intracellular cytokine staining". Cytometry Part A. 87 (4): 289–92. doi:10.1002/cyto.a.22590. PMC 4454451. PMID 25407958.
- Neumann, B; Sopper, S; Stahl-Hennig, C (September 2015). "OMIP-026: Phenotypic analysis of B and plasma cells in rhesus macaques". Cytometry Part A. 87 (9): 800–2. doi:10.1002/cyto.a.22712. PMID 26115002.
- Unsworth, A; Anderson, R; Haynes, N; Britt, K (June 2016). "OMIP-032: Two multi-color immunophenotyping panels for assessing the innate and adaptive immune cells in the mouse mammary gland". Cytometry Part A. 89 (6): 527–30. doi:10.1002/cyto.a.22867. PMID 27214375.
- Zhu, G; Brayer, J; Padron, E; Mulé, JJ; Mailloux, AW (October 2018). "OMIP-049: Analysis of Human Myelopoiesis and Myeloid Neoplasms". Cytometry Part A. 93 (10): 982–986. doi:10.1002/cyto.a.23598. PMC 6484443. PMID 30347519.
- Nettey, L; Giles, AJ; Chattopadhyay, PK (November 2018). "OMIP-050: A 28-color/30-parameter Fluorescence Flow Cytometry Panel to Enumerate and Characterize Cells Expressing a Wide Array of Immune Checkpoint Molecules". Cytometry Part A. 93 (11): 1094–1096. doi:10.1002/cyto.a.23608. PMID 30347136.
- Swieboda, D; Guo, Y; Sagawe, S; Thwaites, RS; Nadel, S; Openshaw, PJM; Culley, FJ (December 2019). "OMIP-062: A 14-Color, 16-Antibody Panel for Immunophenotyping Human Innate Lymphoid, Myeloid and T Cells in Small Volumes of Whole Blood and Pediatric Airway Samples". Cytometry Part A. 95 (12): 1231–1235. doi:10.1002/cyto.a.23907. PMC 6972618. PMID 31633878.
- Imbratta, C; Reid, TD; Toefy, A; Scriba, TJ; Nemes, E (March 2024). "OMIP-101: 27-color flow cytometry panel for immunophenotyping of major leukocyte populations in fixed whole blood". Cytometry Part A. 105 (3): 165–170. doi:10.1002/cyto.a.24827. PMID 38343094.